Bravin, A., Coan, P., Coan, P.: X-ray phase-contrast imaging: from pre-clinical applications towards clinics. Phys. Med. Biol. 58(1), 1–35 (2013)
Article
Google Scholar
Fratini, M., Bukreeva, I., Campi, G., Brun, F., Tromba, G., Modregger, P., Bucci, D., Battaglia, G., Spanó, R., Mastrogiacomo, M., Requardt, H., Giove, F., Bravin, A., Cedola, A.: Simultaneous submicrometric 3D imaging of the micro-vascular network and the neuronal system in a mouse spinal cord. Scientific Reports 5 (2014)
Mokso, R., Marone, F., Irvine, S., Nyvlt, M., Schwyn, D., Mader, K., Taylor, G.K., Krapp, H.G., Skeren, M., Stampanoni, M.: Advantages of phase retrieval for fast X-ray tomographic microscopy. J. Phys. D: Appl. Phys. 46(49) (2013)
Longo, R., Arfelli, F., Bellazzini, R., Bottigli, U., Brez, A., Brun, F., Brunetti, A., Delogu, P., Di Lillo, F., Dreossi, D., Fanti, V., Fedon, C., Golosio, B., Lanconelli, N., Mettivier, G., Minuti, M., Oliva, P., Pinchera, M., Rigon, L., Russo, P., Sarno, A., Spandre, G., Tromba, G., Zanconati, F.: Towards breast tomography with synchrotron radiation at Elettra: first images. Phys. Med. Biol. 61(4), 1634–1649 (2016)
Article
Google Scholar
Burvall, A., Lundström, U., Takman, P.A.C., Larsson, D.H., Hertz, H.M.: Phase retrieval in X-ray phase-contrast imaging suitable for tomography. Opt. Express 19(11), 10359–10376 (2011)
Article
Google Scholar
Paganin, D., Mayo, S.C., Gureyev, T.E., Miller, P.R., Wilkins, S.W.: Simultaneous phase and amplitude extraction from a single defocused image of a homogeneous object. J. Microsc. 206(1), 33–40 (2002)
Article
Google Scholar
Vo, N.T., Drakopoulos, M., Atwood, R.C., Reinhard, C.: Reliable method for calculating the center of rotation in parallel-beam tomography. Opt. Express 22(16), 19078–19086 (2014)
Article
Google Scholar
Goscinski, W.J., McIntosh, P., Felzmann, U., Maksimenko, A., Hall, C.J., Gureyev, T., Thompson, D., Janke, A., Galloway, G., Killeen, N.E.B., Raniga, P., Kaluza, O., Ng, A., Poudel, G., Barnes, D.G., Nguyen, T., Bonnington, P., Egan, G.F.: The multi-modal Australian ScienceS imaging and visualization environment (MASSIVE) high performance computing infrastructure: Applications in neuroscience and neuroinformatics research. Front. Neuroinform. 8(MAR), 30 (2014)
Brun, F., Accardo, A., Kourousias, G., Dreossi, D., Pugliese, R.: Effective implementation of ring artifacts removal filters for synchrotron radiation microtomographic images. International Symposium on Image and Signal Processing and Analysis, ISPA 672–676, (2013)
Bukreeva, I., Mittone, A., Bravin, A., Festa, G., Alessandrelli, M., Coan, P., Formoso, V., Agostino, R.G., Giocondo, M., Ciuchi, F., Fratini, M., Massimi, L., Lamarra, A., Andreani, C., Bartolino, R., Gigli, G., Ranocchia, G., Cedola, A.: Virtual unrolling and deciphering of herculaneum papyri by X-ray phase-contrast tomography. Sci. Rep. 6, 27227 (2016)
Article
Google Scholar
Brun, F., Pacilé, S., Accardo, A., Kourousias, G., Dreossi, D., Mancini, L., Tromba, G., Pugliese, R.: Enhanced and flexible software tools for X-ray computed tomography at the italian synchrotron radiation facility elettra. Fundam. Informaticae 141(2–3), 233–243 (2015)
Article
Google Scholar
Tromba, G., Longo, R., Abrami, A., Arfelli, F., Astolfo, A., Bregant, P., Brun, F., Casarin, K., Chenda, V., Dreossi, D., Hola, M., Kaiser, J., Mancini, L., Menk, R.H., Quai, E., Quaia, E., Rigon, L., Rokvic, T., Sodini, N., Sanabor, D., Schultke, E., Tonutti, M., Vascotto, A., Zanconati, F., Cova, M., Castelli, E.: The SYRMEP beamline of Elettra: clinical mammography and bio-medical applications. AIP Conference Proceedings 1266, 18–23 (2010)
Article
Google Scholar
Gürsoy, D., De Carlo, F., Xiao, X., Jacobsen, C.: TomoPy: a framework for the analysis of synchrotron tomographic data. J. Synchrotron Radiat. 21(5), 1188–1193 (2014)
Article
Google Scholar
van Aarle, W., Palenstijn, W.J., De Beenhouwer, J., Altantzis, T., Bals, S., Batenburg, K.J., Sijbers, J.: The ASTRA toolbox: a platform for advanced algorithm development in electron tomography. Ultramicroscopy 157, 35–47 (2015)
Article
Google Scholar
Pelt, D.M., Gürsoy, D., Palenstijn, W.J., Sijbers, J., De Carlo, F., Batenburg, K.J.: Integration of TomoPy and the ASTRA toolbox for advanced processing and reconstruction of tomographic synchrotron data. J. Synchrotron Radiat. 23(3), 842–849 (2016)
Article
Google Scholar
Buzug, T.M.: Computed Tomography: From Photon Statistics to Modern Cone-Beam CT. Springer, Berlin, Heidelberg (2008)
Google Scholar
Mirone, A., Brun, E., Gouillart, E., Tafforeau, P., Kieffer, J.: The PyHST2 hybrid distributed code for high speed tomographic reconstruction with iterative reconstruction and a priori knowledge capabilities. Nucl. Instrum. Methods Phys. Res. Sect. B: Beam Interact.Mater. Atoms 324, 41–48 (2014)
Article
Google Scholar
Van Nieuwenhove, V., De Beenhouwer, J., De Carlo, F., Mancini, L., Marone, F., Sijbers, J.: Dynamic intensity normalization using eigen flat fields in X-ray imaging. Opt. Express 23(21), 27975–27989 (2015)
Article
Google Scholar
Sijbers, J., Postnov, A.: Reduction of ring artefacts in high resolution micro-CT reconstructions. Phys. Med. Biol. 49(14), 247–253 (2004)
Article
Google Scholar
Raven, C.: Numerical removal of ring artifacts in microtomography. Rev. Sci. Instrum. 69(8), 2978–2980 (1998)
Article
Google Scholar
Boin, M., Haibel, A.: Compensation of ring artefacts in synchrotron tomographic images. Opt. Express 14(25), 12071–12075 (2006)
Article
Google Scholar
Münch, B., Trtik, P., Marone, F., Stampanoni, M.: Stripe and ring artifact removal with combined wavelet—Fourier filtering. Opt. Express 17(10), 8567–8591 (2009)
Article
Google Scholar
Oimoen, M.J.: An effective filter for removal of production artifacts in U.S. Geological Survey 7.5-minute digital elevation models. Proceedings of the Fourteenth International Conference on Applied Geologic Remote Sensing, Las Vegas, Nevada, 311–319 (2000)
Moosmann, J., Hofmann, R., Baumbach, T.: Single-distance phase retrieval at large phase shifts. Opt. Express 19(13), 12066–12073 (2011)
Article
Google Scholar
Irvine, S., Mokso, R., Modregger, P., Wang, Z., Marone, F., Stampanoni, M.: Simple merging technique for improving resolution in qualitative single image phase contrast tomography. Opt. Express 22(22), 27257–27269 (2014)
Article
Google Scholar
Weitkamp, T., Haas, D., Wegrzynek, D., Rack, A.: ANKAphase: software for single-distance phase retrieval from inline X-ray phase-contrast radiographs. J. Synchrotron Radiat. 18(4), 617–629 (2011)
Article
Google Scholar
Hofmann, R., Moosmann, J., Baumbach, T.: Criticality in single-distance phase retrieval. Opt. Express 19(27), 25881–25890 (2011)
Article
Google Scholar
Pacilé, S., Brun, F., Dullin, C., Nesterets, Y.I., Dreossi, D., Mohammadi, S., Tonutti, M., Stacul, F., Lockie, D., Zanconati, F., Accardo, A., Tromba, G., Gureyev, T.E.: Clinical application of low-dose phase contrast breast ct: methods for the optimization of the reconstruction workflow. Biomed. Opt. Express 6(8), 3099–3112 (2015)
Article
Google Scholar
Pelt, D.M., Batenburg, K.J.: Improving filtered backprojection reconstruction by data-dependent filtering. IEEE Trans. Image Process. 23(11), 4750–4762 (2014)
Article
Google Scholar
Pelt, D.M., Batenburg, K.J.: Accurately approximating algebraic tomographic reconstruction by filtered backprojection. In: Proceedings of The 13th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, pp. 158–161 (2015)